Posterior#

class cuqi.distribution.Posterior(likelihood, prior, **kwargs)#

Posterior probability distribution defined by likelihood and prior. The geometry is automatically determined from the model and prior. Generates instance of cuqi.distribution.Posterior

Parameters:
  • likelihood (Likelihood function, cuqi.likelihood.Likelihood.)

  • prior (Prior distribution, cuqi.distribution.Distribution.)

__init__(likelihood, prior, **kwargs)#

Initialize the core properties of the distribution.

Parameters:
  • name (str, default None) – Name of distribution.

  • geometry (Geometry, default _DefaultGeometry (or None)) – Geometry of distribution.

  • is_symmetric (bool, default None) – Indicator if distribution is symmetric.

Methods

__init__(likelihood, prior, **kwargs)

Initialize the core properties of the distribution.

disable_FD()

Disable finite difference approximation for logd gradient.

enable_FD([epsilon])

Enable finite difference approximation for logd gradient.

get_conditioning_variables()

Return the conditioning variables of this distribution (if any).

get_mutable_variables()

Return any public variable that is mutable (attribute or property) except those in the ignore_vars list

get_parameter_names()

Returns the names of the parameters that the density can be evaluated at or conditioned on.

gradient(*args, **kwargs)

Returns the gradient of the log density at x.

logd(*args, **kwargs)

Evaluate the un-normalized log density function of the distribution.

logpdf(*args, **kwargs)

Returns the logpdf of the posterior distribution

pdf(x)

Evaluate the log probability density function of the distribution.

sample([N])

Sample from the distribution.

to_likelihood(data)

Convert conditional distribution to a likelihood function given observed data

Attributes

FD_enabled

Returns True if finite difference approximation of the logd gradient is enabled.

FD_epsilon

Spacing for the finite difference approximation of the logd gradient.

data

dim

Return the dimension of the distribution based on the geometry.

geometry

Return the geometry of the distribution.

is_cond

Returns True if instance (self) is a conditional distribution.

model

Extract the cuqi model from likelihood.

name

Name of the random variable associated with the density.